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PDB 
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Phospho-sites

Showing 18 results

Swiss-Prot Position Modification Source Evidence Singly phosphorylated
67 SER PRIDE yes
69 THR PRIDE yes
127 SER UP, PRIDE Combined
132 TYR PRIDE yes
136 SER PRIDE yes
139 SER UP, PRIDE Combined yes
150 SER UP, PRIDE Combined yes
165 SER UP, PRIDE Similarity
173 THR PRIDE
187 THR UP, PRIDE Combined
190 THR UP, PRIDE Combined
204 SER PRIDE yes
262 SER PRIDE
270 SER UP, PRIDE Combined
272 TYR PRIDE
307 SER UP Combined
312 SER UP Combined
472 SER PRIDE yes

3D structure is not available

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Phosphorylated amino acids are colored red on the inner ring.

The first amino acid of the protein sequence is colored darker on each ring.

Phospho peptides

Showing 23 results

Sequence Modified position (Swiss-Prot) Peptide start Peptide end Modified position (Peptide) Number of projects
67 67 75 1 2
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD003531 6 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD002286 4 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 -
69 67 75 3 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD002286 6 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 -
127 127 142 1 3
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 1 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
PXD003531 3 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon -
132 127 142 6 2
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001565 4 Evaluation of phospho-tyrosine antibodies for label-free phosphoproteomics Homo sapiens (Human) PARTIAL 2015-12-09 colon,brain
PXD003198 2 Characterisation of pancreatic ductal adenocarcinoma subtypes by global phosphotyrosine profiling Homo sapiens (Human) PARTIAL 2016-06-09 pancreatic cell line -
132 127 152 6 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001546 1 Reproducibility of label-free single-shot phosphoproteomics applied to CRC cell lines Homo sapiens (Human) PARTIAL 2015-04-15 cell culture
136 127 152 10 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001546 1 Reproducibility of label-free single-shot phosphoproteomics applied to CRC cell lines Homo sapiens (Human) PARTIAL 2015-04-15 cell culture
139 127 142 13 6
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 9 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture -
PXD003531 10 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD004940 3 Performance of the Orbitrap Fusion Lumos Tribrid in single-shot analyses of human samples Homo sapiens (Human) PARTIAL 2017-03-09 HeLa cell -
PXD002286 1 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 - -
PXD005366 9 Robust, sensitive and automated phosphopeptide enrichment optimized for low sample amounts applied to primary hippocampal neurons Homo sapiens (Human),Rattus norvegicus (Rat) PARTIAL 2016-12-14 cell culture
PXD004452 20 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon -
139 127 152 13 2
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD005366 1 Robust, sensitive and automated phosphopeptide enrichment optimized for low sample amounts applied to primary hippocampal neurons Homo sapiens (Human),Rattus norvegicus (Rat) PARTIAL 2016-12-14 cell culture -
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
150 127 152 24 3
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
PXD001550 1 Human CRC cell line baseline phosphoproteomics Homo sapiens (Human) PARTIAL 2015-04-15 cell culture -
PXD000680 1 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell -
165 164 177 2 5
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001060 1 Fe-IMAC column based phospho enrichment Homo sapiens (Human) PARTIAL 2015-08-19 Epithelial cell -
PXD000474 1 Simulated phosphopeptide spectral library for confident site localization Homo sapiens (Human) PARTIAL 2015-03-17 HeLa cell -
PXD001333 2 Anion-Exchange Chromatography of Tryptic and Phosphopeptides: WAX vs. SAX and AEX vs. ERLIC Homo sapiens (Human) PARTIAL 2015-04-23 HeLa cell
PXD005366 6 Robust, sensitive and automated phosphopeptide enrichment optimized for low sample amounts applied to primary hippocampal neurons Homo sapiens (Human),Rattus norvegicus (Rat) PARTIAL 2016-12-14 cell culture -
PXD000680 5 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell -
165 165 177 1 10
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001060 8 Fe-IMAC column based phospho enrichment Homo sapiens (Human) PARTIAL 2015-08-19 Epithelial cell -
PXD000612 4 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
PXD001546 1 Reproducibility of label-free single-shot phosphoproteomics applied to CRC cell lines Homo sapiens (Human) PARTIAL 2015-04-15 cell culture -
PXD000474 5 Simulated phosphopeptide spectral library for confident site localization Homo sapiens (Human) PARTIAL 2015-03-17 HeLa cell -
PXD003531 18 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD001333 1 Anion-Exchange Chromatography of Tryptic and Phosphopeptides: WAX vs. SAX and AEX vs. ERLIC Homo sapiens (Human) PARTIAL 2015-04-23 HeLa cell -
PXD005366 6 Robust, sensitive and automated phosphopeptide enrichment optimized for low sample amounts applied to primary hippocampal neurons Homo sapiens (Human),Rattus norvegicus (Rat) PARTIAL 2016-12-14 cell culture -
PXD001550 14 Human CRC cell line baseline phosphoproteomics Homo sapiens (Human) PARTIAL 2015-04-15 cell culture -
PXD004452 2 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon -
PXD000680 14 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell -
173 164 177 10 4
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000474 1 Simulated phosphopeptide spectral library for confident site localization Homo sapiens (Human) PARTIAL 2015-03-17 HeLa cell -
PXD001333 2 Anion-Exchange Chromatography of Tryptic and Phosphopeptides: WAX vs. SAX and AEX vs. ERLIC Homo sapiens (Human) PARTIAL 2015-04-23 HeLa cell
PXD005366 6 Robust, sensitive and automated phosphopeptide enrichment optimized for low sample amounts applied to primary hippocampal neurons Homo sapiens (Human),Rattus norvegicus (Rat) PARTIAL 2016-12-14 cell culture -
PXD000680 5 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell -
173 165 177 9 10
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001060 12 Fe-IMAC column based phospho enrichment Homo sapiens (Human) PARTIAL 2015-08-19 Epithelial cell
PXD000612 7 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture -
PXD001546 2 Reproducibility of label-free single-shot phosphoproteomics applied to CRC cell lines Homo sapiens (Human) PARTIAL 2015-04-15 cell culture -
PXD000474 5 Simulated phosphopeptide spectral library for confident site localization Homo sapiens (Human) PARTIAL 2015-03-17 HeLa cell -
PXD003531 18 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD001333 1 Anion-Exchange Chromatography of Tryptic and Phosphopeptides: WAX vs. SAX and AEX vs. ERLIC Homo sapiens (Human) PARTIAL 2015-04-23 HeLa cell -
PXD005366 8 Robust, sensitive and automated phosphopeptide enrichment optimized for low sample amounts applied to primary hippocampal neurons Homo sapiens (Human),Rattus norvegicus (Rat) PARTIAL 2016-12-14 cell culture -
PXD001550 13 Human CRC cell line baseline phosphoproteomics Homo sapiens (Human) PARTIAL 2015-04-15 cell culture -
PXD004452 2 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon -
PXD000680 13 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell -
187 182 192 6 2
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 2 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture -
PXD004452 7 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
190 182 192 9 3
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 2 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture -
PXD003531 7 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD004452 14 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
190 184 192 7 5
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001060 1 Fe-IMAC column based phospho enrichment Homo sapiens (Human) PARTIAL 2015-08-19 Epithelial cell -
PXD004940 4 Performance of the Orbitrap Fusion Lumos Tribrid in single-shot analyses of human samples Homo sapiens (Human) PARTIAL 2017-03-09 HeLa cell
PXD003531 1 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD005366 1 Robust, sensitive and automated phosphopeptide enrichment optimized for low sample amounts applied to primary hippocampal neurons Homo sapiens (Human),Rattus norvegicus (Rat) PARTIAL 2016-12-14 cell culture -
PXD000680 1 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell -
204 198 207 7 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 1 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
262 257 282 6 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001550 3 Human CRC cell line baseline phosphoproteomics Homo sapiens (Human) PARTIAL 2015-04-15 cell culture
270 256 282 15 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD004452 9 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
270 257 282 14 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001550 6 Human CRC cell line baseline phosphoproteomics Homo sapiens (Human) PARTIAL 2015-04-15 cell culture
272 256 282 17 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD004452 2 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
272 257 282 16 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001550 3 Human CRC cell line baseline phosphoproteomics Homo sapiens (Human) PARTIAL 2015-04-15 cell culture
472 470 481 3 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 2 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture

Structures

Showing 20 results

PDB id Chain Method Resolution Stoichiometry Interfacing Molecule/Chain Complex Formation Significance Score (CSS) P-sites View Structure
1X8B A X-ray 1.809999942779541 Monomer [MG]A:602 0.053773038 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 88.65658569335938 0.0
312 312 SER E 0.92 18.416044235229492 0.0
472 472 SER C 0.95 15.350794792175293 0.0
480 480 SER H 1.0 44.965763092041016 0.0
5VD8 A X-ray 1.850000023841858 Monomer [98M]A:601 0.07783405 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 77.03748321533203 0.0
312 312 SER E 0.92 21.12235450744629 0.0
472 472 SER C 0.95 84.87744140625 0.0
480 480 SER H 1.0 42.117271423339844 0.0
5VD9 A X-ray 1.8700000047683716 Monomer [CL]A:602 0.060515672 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 80.8042221069336 0.0
312 312 SER E 0.92 23.46929931640625 0.0
472 472 SER C 0.95 94.12410736083984 0.0
480 480 SER C 1.0 38.050498962402344 0.0
2IN6 A X-ray 1.899999976158142 2 [839]A:901 0.1 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 91.9706802368164 5.151893615722656
312 312 SER E 0.92 17.77427864074707 0.0
472 472 SER C 0.95 15.949529647827148 0.0
480 480 SER H 1.0 44.106597900390625 0.0
5V5Y A X-ray 1.899999976158142 1 [8X7]A:601 0.12961866 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 78.24375915527344 2.4233040809631348
312 312 SER E 0.92 21.387744903564453 0.0
472 472 SER C 0.95 59.21769332885742 0.0
480 480 SER H 1.0 41.93552017211914 0.0
5VC5 A X-ray 1.9299999475479126 Monomer [96M]A:601 0.070390485 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 91.23033142089844 0.0
312 312 SER E 0.92 20.93810272216797 0.0
472 472 SER C 0.95 74.02515411376953 0.0
480 480 SER H 1.0 45.72422790527344 0.0
5VC3 A X-ray 1.9700000286102295 Monomer [DB8]A:601 0.100309275 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 87.2494125366211 0.0
312 312 SER E 0.92 24.82037353515625 0.0
472 472 SER C 0.95 86.13642883300781 0.0
480 480 SER C 1.0 45.44896697998047 0.0
5VC6 A X-ray 2.0 Monomer A 0.0 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 79.42300415039062 0.0
312 312 SER E 0.92 20.200590133666992 0.0
472 472 SER C 0.95 76.66720581054688 0.0
480 480 SER H 1.0 41.441654205322266 0.0
5VD4 A X-ray 2.0199999809265137 Monomer [99J]A:601 0.041249093 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 84.44384002685547 3.9054884910583496
312 312 SER E 0.92 17.588096618652344 0.0
472 472 SER C 0.95 71.07057189941406 0.0
480 480 SER H 1.0 44.03962707519531 0.0
5VD5 A X-ray 2.049999952316284 Monomer [CL]A:602 0.051857732 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 76.67049407958984 0.0
312 312 SER E 0.92 18.223533630371094 0.0
472 472 SER C 0.95 42.09444808959961 0.0
480 480 SER H 1.0 45.04151153564453 0.0
5VD2 A X-ray 2.049999952316284 Monomer [CL]A:603 0.028129723 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 75.46537017822266 0.0
312 312 SER E 0.92 18.343215942382812 0.0
472 472 SER C 0.95 84.31282043457031 0.0
480 480 SER H 1.0 43.89701461791992 0.0
5VD7 A X-ray 2.0799999237060547 Monomer [99V]A:601 0.060270224 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 76.16243743896484 0.0
312 312 SER E 0.92 18.138385772705078 0.0
472 472 SER C 0.95 67.0102767944336 0.0
480 480 SER H 1.0 29.48122215270996 0.0
5VC4 A X-ray 2.0999999046325684 Monomer [XZN]A:601 0.073257364 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 76.44390106201172 0.0
312 312 SER E 0.92 16.06534767150879 0.0
472 472 SER C 0.95 42.1539192199707 0.0
480 480 SER C 1.0 39.530616760253906 0.0
5VDA A X-ray 2.0999999046325684 Monomer [CL]A:602 0.05495845 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 77.82782745361328 0.0
312 312 SER E 0.92 21.678442001342773 0.0
472 472 SER C 0.95 94.51810455322266 0.0
480 480 SER C 1.0 47.447967529296875 0.0
3BIZ A X-ray 2.200000047683716 2 [CL]A:1 0.43853408 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER C 0.88 133.02362060546875 0.0
312 312 SER C 0.92 51.68700408935547 0.0
472 472 SER C 0.95 18.657299041748047 0.0
480 480 SER H 1.0 41.6533317565918 0.0
2IO6 A X-ray 2.200000047683716 Monomer [330]A:901 0.1 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER C 0.88 130.49310302734375 0.0
312 312 SER C 0.92 46.89259719848633 0.0
472 472 SER C 0.95 17.945430755615234 0.0
480 480 SER C 1.0 41.531982421875 0.0
3BI6 A X-ray 2.200000047683716 2 [CL]A:601 0.070913255 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 93.2015609741211 0.0
312 312 SER E 0.92 22.3507022857666 0.0
472 472 SER C 0.95 18.582683563232422 0.0
480 480 SER H 1.0 43.101810455322266 0.0
2Z2W A X-ray 2.2200000286102295 2 [CL]A:903 0.39989346 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER C 0.88 92.12918853759766 0.0
312 312 SER E 0.92 28.511667251586914 0.0
472 472 SER C 0.95 18.786787033081055 0.0
480 480 SER C 1.0 45.514156341552734 0.0
3CR0 A X-ray 2.299999952316284 Monomer [CL]A:1 0.058260716 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 89.66987609863281 0.0
312 312 SER E 0.92 21.05361557006836 0.0
472 472 SER C 0.95 20.10296058654785 0.0
480 480 SER C 1.0 42.58922576904297 0.0
3CQE A X-ray 2.5 Monomer [CL]A:2 0.05193281 307, 312, 472
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
307 307 SER E 0.88 87.86250305175781 0.0
312 312 SER E 0.92 20.928058624267578 0.0
472 472 SER C 0.95 17.14512062072754 0.0
480 480 SER H 1.0 43.70488357543945 0.0

Mutations

Showing 2 results

Swiss-Prot Position Amino acid (Wild type) Amino acid (Variant) Variant Type Disease
210 G C Polymorphism
472 S I Polymorphism