Welcome to Scop3P

Search for the desired protein with Uniprot accession, protein name/keyword, ProteomeXchange ID or PDB id

  • Zoom in and zoom out (both with mouse and buttons on the right top corner) to see modificationson the protein
  • Slide the chart to see other modifications (both with mouse and buttons on the right topcorner)
  • Hover on the modification to see more information and position on the structure.
PDB 
 AlphaFold
Phospho-sites

Showing 20 results

Swiss-Prot Position Modification Source Evidence Singly phosphorylated
85 PhosphoS PRIDE yes
130 PhosphoS PRIDE yes
132 PhosphoY PRIDE yes
133 PhosphoS PRIDE yes
484 PhosphoY PRIDE yes
526 PhosphoS PRIDE yes
590 PhosphoS PRIDE yes
717 PhosphoS PRIDE yes
894 PhosphoS PRIDE yes
1241 PhosphoT SP, PRIDE Combined yes
1245 PhosphoS PRIDE yes
1247 PhosphoS PRIDE yes
1259 PhosphoS PRIDE yes
1344 PhosphoT PRIDE yes
1351 PhosphoT PRIDE yes
1461 PhosphoS PRIDE yes
1507 PhosphoS PRIDE yes
1552 PhosphoS PRIDE yes
1585 PhosphoS PRIDE yes
1646 PhosphoY PRIDE yes

3D structure is not available

Display Settings

Hover over to see the values, zoom (in/out) or drag by using the mouse pointer.

Phosphorylated amino acids are colored red on the inner ring.

The first amino acid of the protein sequence is colored darker on each ring.

Phospho peptides

Showing 23 results

Sequence Modified position (Swiss-Prot) Peptide start Peptide end Modified position (Peptide) Number of projects
85 83 100 3 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD000612 2 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
130 112 137 19 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
132 116 137 17 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD000612 1 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
133 112 137 22 2
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD000612 7 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
484 479 489 6 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD000612 7 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
526 524 539 3 2
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD000612 9 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
590 590 602 1 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD000612 2 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
717 711 721 7 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
894 886 897 9 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD000612 1 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
1241 1230 1244 12 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD001060 1 Fe-IMAC column based phospho enrichment Homo sapiens (Human) PARTIAL 2015-08-19 Epithelial cell
1241 1232 1244 10 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD001060 2 Fe-IMAC column based phospho enrichment Homo sapiens (Human) PARTIAL 2015-08-19 Epithelial cell
1245 1241 1272 5 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD000612 1 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
1247 1245 1267 3 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD002286 1 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 -
1259 1245 1267 15 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD000612 2 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
1344 1334 1347 11 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD002057 2 Proteomic analysis identifies novel pathways linking epithelial-to-mesenchymal transition with resistance to HER2-targeted therapy Homo sapiens (Human) COMPLETE 2016-02-22 cell culture
1351 1348 1356 4 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD004452 2 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
1461 1459 1477 3 9
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD001060 3 Fe-IMAC column based phospho enrichment Homo sapiens (Human) PARTIAL 2015-08-19 Epithelial cell
PXD000612 53 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
PXD004415 10 Quantitative phosphoproteome analysis of cisplatin-induced apoptosis in Jurkat T cells Homo sapiens (Human) COMPLETE 2017-05-11 T lymphocyte
PXD000474 1 Simulated phosphopeptide spectral library for confident site localization Homo sapiens (Human) PARTIAL 2015-03-17 HeLa cell
PXD003531 3 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell
PXD005366 17 Robust, sensitive and automated phosphopeptide enrichment optimized for low sample amounts applied to primary hippocampal neurons Homo sapiens (Human),Rattus norvegicus (Rat) PARTIAL 2016-12-14 cell culture
PXD001374 11 Label-free quantitative phosphoproteomics with novel pairwise abundance normalization reveals synergistic RAS and CIP2A signaling Homo sapiens (Human) PARTIAL 2015-08-24 HeLa cell
PXD004452 29 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
PXD000680 24 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell
1461 1459 1479 3 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD000680 1 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell
1461 1459 1478 3 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD004415 2 Quantitative phosphoproteome analysis of cisplatin-induced apoptosis in Jurkat T cells Homo sapiens (Human) COMPLETE 2017-05-11 T lymphocyte
1507 1480 1509 28 2
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD000612 4 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
PXD004452 3 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
1552 1552 1563 1 3
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD000612 16 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
PXD003531 1 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
1585 1552 1586 34 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD005366 1 Robust, sensitive and automated phosphopeptide enrichment optimized for low sample amounts applied to primary hippocampal neurons Homo sapiens (Human),Rattus norvegicus (Rat) PARTIAL 2016-12-14 cell culture
1646 1635 1651 12 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues
PXD000612 2 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture

Structures

Showing 0 results

PDB id Chain Method Resolution Stoichiometry Interfacing Molecule/Chain Complex Formation Significance Score (CSS) P-sites View Structure

Mutations

Showing 6 results

Swiss-Prot Position Amino acid (Wild type) Amino acid (Variant) Variant Type Disease
54 S L Polymorphism -
265 Q P Disease Microcephaly 9, primary, autosomal recessive (MCPH9) [MIM:614852]
667 K R Disease Seckel syndrome 5 (SCKL5) [MIM:613823]
793 S I Polymorphism -
914 L V Polymorphism -
1106 V A Polymorphism -