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Ex.: O00571, ddx3x (keyword), ATP-dependent RNA helicase DDX3X, PXD000680 or 3JRV

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PDB 
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Phospho-sites

Showing 5 results

Swiss-Prot Position Modification Source Evidence Singly phosphorylated
186 SER PRIDE yes
342 SER PRIDE yes
353 SER UP, PRIDE Combined yes
385 SER PRIDE yes
387 SER PRIDE yes

3D structure is not available

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Phosphorylated amino acids are colored red on the inner ring.

The first amino acid of the protein sequence is colored darker on each ring.

Phospho peptides

Showing 6 results

Sequence Modified position (Swiss-Prot) Peptide start Peptide end Modified position (Peptide) Number of projects
186 182 192 5 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 8 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
342 314 349 29 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
353 350 364 4 3
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001060 5 Fe-IMAC column based phospho enrichment Homo sapiens (Human) PARTIAL 2015-08-19 Epithelial cell -
PXD000612 14 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
PXD004452 5 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon -
385 368 394 18 3
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 2 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture -
PXD004415 13 Quantitative phosphoproteome analysis of cisplatin-induced apoptosis in Jurkat T cells Homo sapiens (Human) COMPLETE 2017-05-11 T lymphocyte -
PXD004452 5 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
385 369 394 17 6
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 2 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture -
PXD001546 1 Reproducibility of label-free single-shot phosphoproteomics applied to CRC cell lines Homo sapiens (Human) PARTIAL 2015-04-15 cell culture -
PXD004415 8 Quantitative phosphoproteome analysis of cisplatin-induced apoptosis in Jurkat T cells Homo sapiens (Human) COMPLETE 2017-05-11 T lymphocyte -
PXD002286 18 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 -
PXD001550 19 Human CRC cell line baseline phosphoproteomics Homo sapiens (Human) PARTIAL 2015-04-15 cell culture -
PXD000680 6 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell -
387 369 394 19 3
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD004415 1 Quantitative phosphoproteome analysis of cisplatin-induced apoptosis in Jurkat T cells Homo sapiens (Human) COMPLETE 2017-05-11 T lymphocyte
PXD002286 1 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 - -
PXD001550 1 Human CRC cell line baseline phosphoproteomics Homo sapiens (Human) PARTIAL 2015-04-15 cell culture -

Structures

Showing 4 results

PDB id Chain Method Resolution Stoichiometry Interfacing Molecule/Chain Complex Formation Significance Score (CSS) P-sites View Structure
4ROC A X-ray 1.899999976158142 4 B 1.0 186, 385, 387
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
186 186 SER E 0.81 52.11915969848633 0.0
310 310 SER H 0.51 22.067777633666992 0.0
376 376 SER C 0.58 92.3851318359375 30.73370933532715
377 377 THR C 0.51 124.40965270996094 0.0
379 379 THR C 0.96 103.3578872680664 18.49675178527832
385 385 SER C 1.0 51.990909576416016 0.4340696930885315
387 387 SER H 0.97 82.49414825439453 0.0
392 392 TYR C 1.0 165.30931091308594 160.59368896484375
4ROE A X-ray 2.200000047683716 4 B 1.0 186, 385, 387
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
186 186 SER E 0.81 53.1049690246582 0.0
310 310 SER H 0.51 22.379179000854492 0.0
376 376 SER C 0.58 80.97239685058594 23.30847930908203
377 377 THR C 0.51 124.53787231445312 0.0
379 379 THR C 0.96 105.50507354736328 17.92923927307129
385 385 SER C 1.0 50.45820999145508 0.31179362535476685
387 387 SER H 0.97 70.1050033569336 0.0
392 392 TYR C 1.0 161.57354736328125 157.4515380859375
5N9G A X-ray 2.700000047683716 5 B 1.0 186, 385, 387
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
186 186 SER E 0.81 51.06779479980469 0.0
310 310 SER H 0.51 68.61367797851562 0.0
376 376 SER C 0.58 81.92008209228516 34.9991340637207
377 377 THR C 0.51 127.62478637695312 4.276495456695557
379 379 THR C 0.96 88.74589538574219 9.568899154663086
385 385 SER C 1.0 57.999855041503906 0.4374697208404541
387 387 SER H 0.97 82.3235855102539 0.0
392 392 TYR C 1.0 163.60633850097656 143.2301788330078
4ROD A X-ray 2.700000047683716 4 B 1.0 186, 385, 387
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
186 186 SER E 0.81 50.89328384399414 0.0
310 310 SER H 0.51 22.195100784301758 0.0
376 376 SER C 0.58 83.81255340576172 35.62129211425781
377 377 THR C 0.51 134.5950164794922 0.0
379 379 THR C 0.96 103.95051574707031 18.6700496673584
385 385 SER C 1.0 50.9516716003418 0.314347505569458
387 387 SER H 0.97 73.53009033203125 0.0
392 392 TYR C 1.0 164.7153778076172 161.06265258789062

Mutations

Showing 0 results

Swiss-Prot Position Amino acid (Wild type) Amino acid (Variant) Variant Type Disease