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Ex.: O00571, ddx3x (keyword), ATP-dependent RNA helicase DDX3X, PXD000680 or 3JRV

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PDB 
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Phospho-sites

Showing 7 results

Swiss-Prot Position Modification Source Evidence Singly phosphorylated
12 SER PRIDE yes
14 SER PRIDE yes
21 SER PRIDE yes
30 SER UP Combined
38 TYR UP, PRIDE Combined yes
48 SER PRIDE yes
77 SER PRIDE yes

3D structure is not available

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Phosphorylated amino acids are colored red on the inner ring.

The first amino acid of the protein sequence is colored darker on each ring.

Phospho peptides

Showing 7 results

Sequence Modified position (Swiss-Prot) Peptide start Peptide end Modified position (Peptide) Number of projects
12 10 19 3 3
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD003531 1 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD005366 1 Robust, sensitive and automated phosphopeptide enrichment optimized for low sample amounts applied to primary hippocampal neurons Homo sapiens (Human),Rattus norvegicus (Rat) PARTIAL 2016-12-14 cell culture -
PXD000680 1 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell
12 10 20 3 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
14 10 19 5 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD003531 1 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell
21 21 27 1 2
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD003531 1 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon -
38 28 39 11 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001565 1 Evaluation of phospho-tyrosine antibodies for label-free phosphoproteomics Homo sapiens (Human) PARTIAL 2015-12-09 colon,brain
48 44 55 5 3
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001060 1 Fe-IMAC column based phospho enrichment Homo sapiens (Human) PARTIAL 2015-08-19 Epithelial cell -
PXD002436 1 Monitoring cellular phosphorylation signaling pathways into chromatin and down to the gene level Homo sapiens (Human) COMPLETE 2015-11-09 HeLa cell -
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
77 77 93 1 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon

Structures

Showing 6 results

PDB id Chain Method Resolution Stoichiometry Interfacing Molecule/Chain Complex Formation Significance Score (CSS) P-sites View Structure
6G5I N EM 3.5 Monomer 2 0.0 12, 14, 21, 30, 38, 48, 77
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
12 12 SER C 1.0 113.3674545288086 91.10628509521484
14 14 SER C 1.0 99.8704605102539 76.65081024169922
21 21 SER C 1.0 94.3775634765625 0.0
30 30 SER H 1.0 52.324745178222656 0.0
38 38 TYR H 0.23 58.15261459350586 0.0
48 48 SER H 1.0 58.99127197265625 58.38557434082031
77 77 SER C 1.0 100.679443359375 30.891389846801758
6G18 N EM 3.5999999046325684 Monomer 2 0.0 12, 14, 21, 30, 38, 48, 77
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
12 12 SER C 1.0 118.94673156738281 92.2703857421875
14 14 SER C 1.0 105.34111785888672 84.61105346679688
21 21 SER C 1.0 83.91949462890625 0.0
30 30 SER H 1.0 32.81370162963867 0.0
38 38 TYR H 0.23 42.98544692993164 0.0
48 48 SER H 1.0 65.2545166015625 64.33773040771484
77 77 SER H 1.0 101.35662841796875 32.373390197753906
6G5H N EM 3.5999999046325684 Monomer 2 0.0 12, 14, 21, 30, 38, 48, 77
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
12 12 SER C 1.0 109.95728302001953 77.12076568603516
14 14 SER C 1.0 104.89376068115234 85.88203430175781
21 21 SER C 1.0 71.71005249023438 0.0
30 30 SER H 1.0 55.7061653137207 0.0
38 38 TYR H 0.23 65.4339599609375 0.0
48 48 SER H 1.0 65.56354522705078 62.53762435913086
77 77 SER H 1.0 97.53282928466797 21.43012809753418
5FLX N EM 3.9000000953674316 Monomer 1 0.0 12, 14, 21, 30, 38, 48, 77
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
12 12 SER C 1.0 95.1328125 77.25672912597656
14 14 SER C 1.0 104.23697662353516 87.82077026367188
21 21 SER C 1.0 58.576045989990234 0.0
30 30 SER C 1.0 68.84294891357422 0.0
38 38 TYR H 0.23 50.8118782043457 0.0
48 48 SER H 1.0 79.91575622558594 76.57477569580078
77 77 SER H 1.0 80.57899475097656 0.0
5A2Q N EM 3.9000000953674316 Monomer 2 0.0 12, 14, 21, 30, 38, 48, 77
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
12 12 SER C 1.0 105.24834442138672 74.81251525878906
14 14 SER C 1.0 95.37030792236328 73.1278076171875
21 21 SER C 1.0 85.86468505859375 0.0
30 30 SER H 1.0 33.62187194824219 0.0
38 38 TYR H 0.23 43.34205627441406 0.0
48 48 SER H 1.0 68.43476867675781 66.91563415527344
77 77 SER H 1.0 98.4871597290039 14.716588973999023
5OA3 N EM 4.300000190734863 Monomer 2 0.0 12, 14, 21, 30, 38, 48, 77
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
12 12 SER C 1.0 105.96600341796875 72.7593002319336
14 14 SER C 1.0 95.93140411376953 72.942138671875
21 21 SER C 1.0 78.78108215332031 0.0
30 30 SER H 1.0 35.94646072387695 0.0
38 38 TYR H 0.23 47.52191925048828 0.0
48 48 SER H 1.0 69.5867919921875 67.15339660644531
77 77 SER H 1.0 93.46694946289062 10.205349922180176

Mutations

Showing 0 results

Swiss-Prot Position Amino acid (Wild type) Amino acid (Variant) Variant Type Disease