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Ex.: O00571, ddx3x (keyword), ATP-dependent RNA helicase DDX3X, PXD000680 or 3JRV

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PDB 
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Phospho-sites

Showing 7 results

Swiss-Prot Position Modification Source Evidence Singly phosphorylated
12 SER PRIDE yes
34 SER UP Combined
184 TYR PRIDE
189 SER PRIDE
210 THR UP Combined
467 SER PRIDE
470 SER PRIDE

3D structure is not available

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Phosphorylated amino acids are colored red on the inner ring.

The first amino acid of the protein sequence is colored darker on each ring.

Phospho peptides

Showing 5 results

Sequence Modified position (Swiss-Prot) Peptide start Peptide end Modified position (Peptide) Number of projects
12 11 18 2 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 1 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
184 182 194 3 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 1 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
189 182 194 8 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 1 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
467 462 492 6 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000680 1 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell
470 462 492 9 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000680 1 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell

Structures

Showing 4 results

PDB id Chain Method Resolution Stoichiometry Interfacing Molecule/Chain Complex Formation Significance Score (CSS) P-sites View Structure
4JGH D X-ray 3.0 4 A 1.0 12, 34, 184, 189, 210
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
12 12 SER C 1.0 90.80066680908203 0.0
34 34 SER C 0.66 106.17526245117188 0.0
184 184 TYR H 1.0 0.0 0.0
189 189 SER C 1.0 87.64681243896484 0.0
210 210 THR H 1.0 0.16833193600177765 0.0
248 248 TYR H 1.0 0.16759192943572998 0.0
4N9F 3 X-ray 3.299999952316284 4 5 0.13052079 12, 34, 184, 189, 210
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
12 12 SER C 1.0 101.21694946289062 0.0
34 34 SER C 0.66 94.41226959228516 0.0
184 184 TYR H 1.0 2.7265260219573975 0.0
189 189 SER C 1.0 84.01245880126953 0.0
210 210 THR H 1.0 0.0 0.0
248 248 TYR H 1.0 2.432615280151367 0.0
3DPL C X-ray 2.5999999046325684 2 R 0.47649693 467, 470
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
467 467 SER E 1.0 24.80158233642578 0.0
470 470 SER H 1.0 83.81255340576172 0.0
3DQV C X-ray 3.0 6 R 1.0
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
467 1467 SER E 1.0 22.246679306030273 0.0
470 1470 SER H 1.0 82.48420715332031 0.0

Mutations

Showing 0 results

Swiss-Prot Position Amino acid (Wild type) Amino acid (Variant) Variant Type Disease