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Ex.: O00571, ddx3x (keyword), ATP-dependent RNA helicase DDX3X, PXD000680 or 3JRV

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PDB 
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Phospho-sites

Showing 5 results

Swiss-Prot Position Modification Source Evidence Singly phosphorylated
8 SER PRIDE yes
11 SER UP, PRIDE Experimental yes
16 SER PRIDE yes
72 THR UP Experimental
74 SER UP, PRIDE Combined yes

3D structure is not available

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Phosphorylated amino acids are colored red on the inner ring.

The first amino acid of the protein sequence is colored darker on each ring.

Phospho peptides

Showing 5 results

Sequence Modified position (Swiss-Prot) Peptide start Peptide end Modified position (Peptide) Number of projects
8 8 20 1 3
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001060 6 Fe-IMAC column based phospho enrichment Homo sapiens (Human) PARTIAL 2015-08-19 Epithelial cell -
PXD000612 4 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture -
PXD002286 8 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 -
11 7 20 5 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 11 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
11 8 20 4 3
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 1 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture -
PXD006482 7 Identification of Missing Proteins in the Phosphoproteome of Kidney Cancer Homo sapiens (Human) COMPLETE 2017-09-01 kidney
PXD002286 2 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 - -
16 8 20 9 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 6 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
74 58 76 17 7
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 4 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture -
PXD004415 3 Quantitative phosphoproteome analysis of cisplatin-induced apoptosis in Jurkat T cells Homo sapiens (Human) COMPLETE 2017-05-11 T lymphocyte -
PXD001546 11 Reproducibility of label-free single-shot phosphoproteomics applied to CRC cell lines Homo sapiens (Human) PARTIAL 2015-04-15 cell culture -
PXD003531 1 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD001550 19 Human CRC cell line baseline phosphoproteomics Homo sapiens (Human) PARTIAL 2015-04-15 cell culture
PXD004452 4 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon -
PXD000680 1 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell -

Structures

Showing 34 results

PDB id Chain Method Resolution Stoichiometry Interfacing Molecule/Chain Complex Formation Significance Score (CSS) P-sites View Structure
2NO7 A X-ray 1.7000000476837158 2 B 0.6253183 72, 74
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 32.90470504760742 0.0
72 72 THR H 0.79 124.28089141845703 0.0
74 74 SER C 1.0 87.68954467773438 0.0
2NO0 A X-ray 1.7999999523162842 4 B 0.6756223 72, 74
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 37.449790954589844 0.0
72 72 THR C 0.79 125.88143157958984 0.0
74 74 SER C 1.0 96.27842712402344 0.0
2NOA A X-ray 1.7999999523162842 4 B 0.7415276 72, 74
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 34.98904037475586 0.0
72 72 THR C 0.79 123.29350280761719 0.0
74 74 SER C 1.0 75.30592346191406 0.0
2NO6 A X-ray 1.899999976158142 4 B 0.46147025 72, 74
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 34.70794677734375 0.0
72 72 THR H 0.79 128.10504150390625 0.0
74 74 SER C 1.0 68.6546630859375 0.0
2NO1 A X-ray 1.909999966621399 4 B 0.67669004 72, 74
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 35.85902786254883 0.0
72 72 THR C 0.79 125.9011001586914 0.0
74 74 SER C 1.0 70.7448959350586 0.0
1P60 A X-ray 1.9600000381469727 4 B 0.6544457 72, 74
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
72 72 THR C 0.79 123.84491729736328 0.0
74 74 SER C 1.0 83.1417236328125 0.0
3MJR A X-ray 2.0999999046325684 2 B 0.59681815 72, 74
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 48.52275085449219 0.0
72 72 THR C 0.79 90.17777252197266 0.0
74 74 SER H 1.0 61.7303466796875 3.1960275173187256
2NO9 A X-ray 2.1500000953674316 4 B 0.78015554 72, 74
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 32.262596130371094 0.0
72 72 THR C 0.79 127.28070068359375 0.0
74 74 SER C 1.0 74.77206420898438 0.0
2ZI3 A X-ray 2.299999952316284 4 B 0.7226465 72, 74
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 31.386022567749023 0.0
72 72 THR H 0.79 126.19820404052734 0.0
74 74 SER C 1.0 71.3910903930664 0.0
2ZI9 A X-ray 2.509999990463257 4 B 0.5038504 72, 74
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 34.774627685546875 0.0
72 72 THR H 0.79 128.06741333007812 0.0
74 74 SER C 1.0 79.08914184570312 0.0
5MQT A X-ray 3.200000047683716 2 [UDP]A:301 0.4542283 72, 74
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 25.73494529724121 0.0
72 72 THR C 0.79 146.22340393066406 0.0
74 74 SER H 1.0 52.73616027832031 0.0
5MQL A X-ray 3.25 2 B 0.41386068 72, 74
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 23.89534568786621 0.0
72 72 THR C 0.79 140.36622619628906 0.0
74 74 SER C 1.0 41.652645111083984 5.27428674697876
4Q1E A X-ray 1.850000023841858 2 B 0.2823841 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 40.663482666015625 0.0
72 72 THR C 0.79 88.1697998046875 0.0
4JLK A X-ray 1.8899999856948853 2 B 0.29595837 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 38.67360305786133 0.0
72 72 THR C 0.79 83.07694244384766 0.0
4Q1A A X-ray 1.899999976158142 2 B 0.36989033 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 56.29777526855469 0.0
72 72 THR C 0.79 68.35215759277344 0.0
3QEO A X-ray 1.899999976158142 2 B 0.5322324 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 32.72502136230469 0.0
72 72 THR C 0.79 77.3670654296875 0.0
4L5B A X-ray 1.940000057220459 2 [UDP]A:302 0.35606465 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 17.91965103149414 0.0
72 72 THR C 0.79 100.2538070678711 0.0
4JLJ A X-ray 2.0 2 [UDP]A:303 0.27945107 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 43.35511779785156 0.0
72 72 THR C 0.79 93.7833480834961 0.0
4Q18 A X-ray 2.0 2 B 0.27327767 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 40.26605987548828 0.0
72 72 THR C 0.79 64.02689361572266 0.0
4Q1D A X-ray 2.0 2 B 0.38583836 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 17.848220825195312 0.0
72 72 THR C 0.79 85.08020782470703 0.0
3QEN A X-ray 2.0 2 B 0.5641001 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 19.627798080444336 0.0
72 72 THR C 0.79 61.543418884277344 0.0
4Q1C A X-ray 2.0 2 [UDP]A:302 0.38942453 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 55.10454559326172 0.0
72 72 THR C 0.79 70.90579986572266 0.0
4KCG A X-ray 2.0899999141693115 2 B 0.39341187 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 23.135299682617188 0.0
72 72 THR C 0.79 132.44711303710938 0.0
4Q19 A X-ray 2.0899999141693115 2 B 0.4054302 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 56.89909744262695 0.0
72 72 THR C 0.79 83.30812072753906 0.0
4Q1F A X-ray 2.0999999046325684 2 B 0.3704086 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 26.11161231994629 0.0
72 72 THR C 0.79 87.02198791503906 0.0
4Q1B A X-ray 2.1500000953674316 2 B 0.36225957 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 88.82604217529297 0.0
72 72 THR C 0.79 127.65178680419922 0.0
4JLN A X-ray 2.1500000953674316 2 B 0.3758408 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 16.897703170776367 0.0
72 72 THR C 0.79 73.5892333984375 0.0
4JLM A X-ray 2.180000066757202 2 [UDP]A:303 0.33911285 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 39.32315444946289 0.0
72 72 THR C 0.79 82.40043640136719 0.0
3QEJ A X-ray 2.490000009536743 2 B 0.50131935 72
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 26.18423843383789 0.0
72 72 THR C 0.79 63.09018325805664 0.0
2ZIA A X-ray 1.7999999523162842 2 B 0.43316725
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 39.94385528564453 0.0
3KFX A X-ray 1.9600000381469727 4 B 0.61225027
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 34.737613677978516 0.0
2ZI7 A X-ray 1.9700000286102295 2 B 0.5659658
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 34.442626953125 0.0
2ZI4 A X-ray 2.0999999046325684 2 A 0.4923644
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER C 1.0 37.24313735961914 0.0
5MQJ A X-ray 3.700000047683716 2 B 0.3083422
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
59 59 SER H 1.0 45.145503997802734 0.0

Mutations

Showing 0 results

Swiss-Prot Position Amino acid (Wild type) Amino acid (Variant) Variant Type Disease