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Ex.: O00571, ddx3x (keyword), ATP-dependent RNA helicase DDX3X, PXD000680 or 3JRV

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PDB 
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Phospho-sites

Showing 10 results

Swiss-Prot Position Modification Source Evidence Singly phosphorylated
3 SER PRIDE yes
20 SER PRIDE yes
75 THR PRIDE yes
78 SER PRIDE yes
112 TYR PRIDE yes
114 SER PRIDE yes
145 SER PRIDE
153 THR PRIDE
194 SER UP, PRIDE Experimental yes
195 THR PRIDE yes

3D structure is not available

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Phosphorylated amino acids are colored red on the inner ring.

The first amino acid of the protein sequence is colored darker on each ring.

Phospho peptides

Showing 11 results

Sequence Modified position (Swiss-Prot) Peptide start Peptide end Modified position (Peptide) Number of projects
3 2 13 2 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 2 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
20 14 24 7 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD004452 2 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
75 73 82 3 2
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000836 1 HOPE-fixation of lung tissue allows retrospective proteome and phosphoproteome studies Homo sapiens (Human) PARTIAL 2014-05-22 lung -
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
78 73 82 6 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
78 75 82 4 2
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD002286 2 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 - -
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon
112 104 119 9 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001565 1 Evaluation of phospho-tyrosine antibodies for label-free phosphoproteomics Homo sapiens (Human) PARTIAL 2015-12-09 colon,brain
114 112 119 3 2
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD002286 1 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 -
PXD006482 1 Identification of Missing Proteins in the Phosphoproteome of Kidney Cancer Homo sapiens (Human) COMPLETE 2017-09-01 kidney -
145 132 156 14 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000680 1 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell
153 132 156 22 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000680 1 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell
194 192 198 3 3
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 1 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
PXD003531 1 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD005366 2 Robust, sensitive and automated phosphopeptide enrichment optimized for low sample amounts applied to primary hippocampal neurons Homo sapiens (Human),Rattus norvegicus (Rat) PARTIAL 2016-12-14 cell culture -
195 192 198 4 8
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD004252 1 Modulating the selectivity of affinity absorbents to multi-phosphopeptides by a novel competitive substitution strategy Homo sapiens (Human) PARTIAL 2016-08-03 cell culture -
PXD000612 77 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture -
PXD004940 1 Performance of the Orbitrap Fusion Lumos Tribrid in single-shot analyses of human samples Homo sapiens (Human) PARTIAL 2017-03-09 HeLa cell
PXD003531 9 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD001333 1 Anion-Exchange Chromatography of Tryptic and Phosphopeptides: WAX vs. SAX and AEX vs. ERLIC Homo sapiens (Human) PARTIAL 2015-04-23 HeLa cell -
PXD002286 15 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 - -
PXD006482 1 Identification of Missing Proteins in the Phosphoproteome of Kidney Cancer Homo sapiens (Human) COMPLETE 2017-09-01 kidney -
PXD004452 1 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon -

Structures

Showing 11 results

PDB id Chain Method Resolution Stoichiometry Interfacing Molecule/Chain Complex Formation Significance Score (CSS) P-sites View Structure
4FMD F X-ray 3.049999952316284 2 E 0.4152203 20, 20, 75, 75, 78, 78, 112, 112, 114, 114, 145, 145, 153, 153
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
20 20 SER C 1.0 71.47175598144531 52.98422622680664
20 20 SER C 1.0 73.58314514160156 53.224273681640625
25 25 SER H 1.0 46.78011703491211 0.0
25 25 SER H 1.0 46.27925491333008 0.0
75 75 THR H 1.0 114.4110336303711 34.316383361816406
75 75 THR H 1.0 108.11380004882812 35.533790588378906
77 77 THR H 1.0 2.053314685821533 0.0
77 77 THR H 1.0 3.343055486679077 0.0
78 78 SER H 1.0 6.813908100128174 0.0
78 78 SER H 1.0 10.142536163330078 0.0
112 112 TYR H 1.0 96.23889923095703 0.0
112 112 TYR H 1.0 81.52738189697266 0.0
114 114 SER C 1.0 36.79927444458008 0.0
114 114 SER C 1.0 43.55487823486328 0.0
145 145 SER H 1.0 78.92074584960938 0.0
145 145 SER H 1.0 85.85456085205078 0.0
153 153 THR C 1.0 0.0 0.0
153 153 THR C 1.0 0.0 0.0
4FMC B X-ray 2.799999952316284 2 A 0.38441914 20, 20, 75, 75, 78, 78, 112, 112, 114, 114, 145, 153
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
20 20 SER C 1.0 65.08454132080078 44.9277229309082
20 20 SER C 1.0 70.28285217285156 40.090660095214844
25 25 SER H 1.0 49.3287467956543 0.0
25 25 SER H 1.0 54.62470245361328 0.0
75 75 THR H 1.0 109.4719009399414 36.012176513671875
75 75 THR C 1.0 94.4157943725586 25.127641677856445
77 77 THR H 1.0 2.571377754211426 0.0
78 78 SER C 1.0 71.86891174316406 0.0
78 78 SER H 1.0 8.90495491027832 0.0
112 112 TYR H 1.0 57.98311233520508 0.0
112 112 TYR H 1.0 68.36700439453125 0.0
114 114 SER C 1.0 15.349712371826172 0.0
114 114 SER C 1.0 97.87950897216797 0.0
145 145 SER H 1.0 87.60038757324219 0.0
153 153 THR C 1.0 0.0 0.0
3SFV A X-ray 1.7300000190734863 2 B 0.6732573 3, 20, 75, 78, 112, 114, 145, 153
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
3 3 SER C 0.0 76.48307800292969 0.0
20 20 SER C 1.0 73.10880279541016 36.11668014526367
75 75 THR C 1.0 121.38671112060547 75.60979461669922
77 77 THR H 1.0 11.464200019836426 0.0
78 78 SER H 1.0 50.015525817871094 0.0
112 112 TYR H 1.0 70.01205444335938 10.397883415222168
114 114 SER C 1.0 63.51044464111328 0.0
145 145 SER H 1.0 88.1317138671875 0.0
153 153 THR C 1.0 0.16589675843715668 0.0
3TKL A X-ray 2.180000066757202 4 B 0.41062638 20, 75, 78, 112, 114, 145, 153
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
20 20 SER C 1.0 48.89818572998047 0.0
25 25 SER H 1.0 38.58487319946289 0.0
75 75 THR C 1.0 125.90571594238281 78.50973510742188
77 77 THR H 1.0 8.159442901611328 0.0
78 78 SER H 1.0 46.52809143066406 0.0
112 112 TYR H 1.0 64.4670639038086 7.98592472076416
114 114 SER C 1.0 69.00070190429688 0.0
145 145 SER H 1.0 78.81038665771484 0.0
153 153 THR E 1.0 0.16038109362125397 0.0
4JVS B X-ray 2.7799999713897705 2 A 0.3968289 20, 75, 78, 112, 114, 145, 153
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
20 20 SER C 1.0 58.327754974365234 20.744117736816406
25 25 SER H 1.0 46.73762130737305 1.3506029844284058
75 75 THR H 1.0 110.26863098144531 0.0
77 77 THR H 1.0 1.9866355657577515 0.0
78 78 SER H 1.0 16.626766204833984 0.0
112 112 TYR H 1.0 43.83656311035156 0.0
114 114 SER C 1.0 44.627323150634766 0.0
145 145 SER C 1.0 86.15987396240234 0.0
153 153 THR C 1.0 0.0 0.0
3L0I B X-ray 2.8499999046325684 4 A 0.4031907 3, 20, 75, 78, 112, 145, 153
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
3 3 SER C 0.0 112.25101470947266 26.375741958618164
20 20 SER C 1.0 81.49334716796875 30.610679626464844
25 25 SER C 1.0 78.20377349853516 0.0
75 75 THR C 1.0 123.54974365234375 24.216934204101562
77 77 THR C 1.0 111.54574584960938 0.0
78 78 SER C 1.0 45.480621337890625 0.0
112 112 TYR C 1.0 136.47933959960938 0.0
145 145 SER C 1.0 86.34171295166016 0.0
153 153 THR C 1.0 9.351419448852539 0.0
4IRU B X-ray 3.200000047683716 12 A 0.4009358 20, 75, 78, 112, 114, 145, 153
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
20 20 SER C 1.0 61.704471588134766 17.61481475830078
25 25 SER H 1.0 46.842384338378906 0.0
75 75 THR H 1.0 116.96324157714844 1.5085958242416382
77 77 THR H 1.0 2.1785147190093994 0.0
78 78 SER H 1.0 16.815752029418945 0.0
112 112 TYR H 1.0 71.69878387451172 0.0
114 114 SER C 1.0 47.55286407470703 0.0
145 145 SER H 1.0 82.60333251953125 0.0
153 153 THR C 1.0 0.0 0.0
4FMB B X-ray 3.200000047683716 12 A 0.39268273 20, 75, 78, 112, 114, 145, 153
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
20 20 SER C 1.0 77.12409973144531 53.7191047668457
25 25 SER H 1.0 45.22908020019531 0.0
75 75 THR H 1.0 101.50686645507812 22.682525634765625
77 77 THR H 1.0 6.756066799163818 0.0
78 78 SER H 1.0 8.87271499633789 0.0
112 112 TYR H 1.0 47.35849380493164 0.0
114 114 SER C 1.0 47.9075927734375 0.0
145 145 SER C 1.0 84.51871490478516 0.0
153 153 THR E 1.0 0.0 0.0
4FME B X-ray 4.099999904632568 2 A 0.40087438 20, 75, 78, 112, 114, 145, 153
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
20 20 SER C 1.0 68.23278045654297 46.069393157958984
25 25 SER C 1.0 49.744232177734375 0.0
75 75 THR H 1.0 115.20221710205078 44.54779052734375
77 77 THR H 1.0 4.982725620269775 0.0
78 78 SER H 1.0 30.264404296875 0.0
112 112 TYR H 1.0 73.4765625 0.0
114 114 SER C 1.0 39.710880279541016 0.0
145 145 SER H 1.0 75.86294555664062 0.0
153 153 THR C 1.0 1.9598759412765503 0.0
2WWX A X-ray 1.5 2 B 1.0 78
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
20 17 SER C 1.0 74.86785125732422 30.636127471923828
25 22 SER H 1.0 74.89928436279297 0.0
75 72 THR C 1.0 104.85279846191406 18.959482192993164
77 74 THR C 1.0 73.44213104248047 23.02968406677246
78 75 SER H 1.0 48.34239959716797 7.66756010055542
79 76 SER H 1.0 88.11749267578125 81.49219512939453
112 109 TYR H 1.0 95.68547821044922 0.0
114 111 SER C 1.0 67.72460174560547 0.0
145 142 SER H 1.0 82.143310546875 0.0
153 150 THR E 1.0 10.35986042022705 0.0
2FOL A X-ray 2.630000114440918 Monomer [GDP]A:201 0.055532336
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
20 17 SER C 1.0 107.88367462158203 6.53944730758667
25 22 SER H 1.0 24.674348831176758 11.759686470031738
112 109 TYR C 1.0 95.18163299560547 0.0
114 111 SER C 1.0 42.99583053588867 0.0
145 142 SER H 1.0 83.03382110595703 0.0
153 150 THR C 1.0 0.0 0.0

Mutations

Showing 0 results

Swiss-Prot Position Amino acid (Wild type) Amino acid (Variant) Variant Type Disease