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Ex.: O00571, ddx3x (keyword), ATP-dependent RNA helicase DDX3X, PXD000680 or 3JRV

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PDB 
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Phospho-sites

Showing 6 results

Swiss-Prot Position Modification Source Evidence Singly phosphorylated
4 SER PRIDE yes
85 SER PRIDE yes
99 SER PRIDE yes
196 TYR PRIDE yes
589 SER PRIDE yes
651 THR PRIDE yes

3D structure is not available

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Phosphorylated amino acids are colored red on the inner ring.

The first amino acid of the protein sequence is colored darker on each ring.

Phospho peptides

Showing 6 results

Sequence Modified position (Swiss-Prot) Peptide start Peptide end Modified position (Peptide) Number of projects
4 2 10 3 2
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD003531 1 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD002286 2 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 -
85 84 97 2 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD002286 1 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 -
99 98 104 2 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD006482 2 Identification of Missing Proteins in the Phosphoproteome of Kidney Cancer Homo sapiens (Human) COMPLETE 2017-09-01 kidney
196 185 197 12 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD003198 2 Characterisation of pancreatic ductal adenocarcinoma subtypes by global phosphotyrosine profiling Homo sapiens (Human) PARTIAL 2016-06-09 pancreatic cell line
589 558 591 32 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000680 1 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell
651 650 655 2 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD003531 1 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell

Structures

Showing 7 results

PDB id Chain Method Resolution Stoichiometry Interfacing Molecule/Chain Complex Formation Significance Score (CSS) P-sites View Structure
4P4S B X-ray 3.299999952316284 2 [GCP]B:701 0.37800795 85, 85, 99, 99, 196, 196
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
85 85 SER H 1.0 13.285037994384766 9.084120750427246
85 85 SER H 1.0 14.47741985321045 8.859453201293945
99 99 SER C 1.0 87.77178955078125 4.187747478485107
99 99 SER C 1.0 87.287353515625 3.7489538192749023
196 196 TYR H 0.52 147.6559295654297 0.0
196 196 TYR H 0.52 148.7078857421875 0.0
5GTM A X-ray 2.9000000953674316 Monomer B 0.0 85, 196, 589, 651
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
85 85 SER H 1.0 6.358556270599365 0.0
196 196 TYR H 0.52 194.95193481445312 0.0
589 589 SER H 0.48 5.607504844665527 0.0
651 651 THR H 0.37 62.73602294921875 0.0
3SZR A X-ray 3.5 2 A 1.0 85, 196, 589, 651
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
85 85 SER H 1.0 28.97020149230957 0.0
196 196 TYR H 0.52 128.47305297851562 0.0
589 589 SER H 0.48 2.3774030208587646 0.0
651 651 THR H 0.37 32.449893951416016 0.0
4P4U A X-ray 1.899999976158142 2 [SO4]A:703 0.2482949 85, 196
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
85 85 SER H 1.0 10.396066665649414 0.14553771913051605
196 196 TYR H 0.52 143.66851806640625 0.0
4P4T A X-ray 2.299999952316284 2 [GDP]A:701 0.28153148 85, 196
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
85 85 SER H 1.0 22.091848373413086 16.33228302001953
196 196 TYR H 0.52 159.09068298339844 0.0
3LJB A X-ray 2.4000000953674316 2 B 1.0 589
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
589 589 SER H 0.48 6.750436305999756 0.0
3ZYS B EM 12.199999809265137 Monomer A 0.0 589
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
589 589 SER H 0.48 1.5960041284561157 0.0

Mutations

Showing 3 results

Swiss-Prot Position Amino acid (Wild type) Amino acid (Variant) Variant Type Disease
379 V I Polymorphism
381 A V Polymorphism
611 Q H Polymorphism