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Ex.: O00571, ddx3x (keyword), ATP-dependent RNA helicase DDX3X, PXD000680 or 3JRV

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PDB 
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Phospho-sites

Showing 6 results

Swiss-Prot Position Modification Source Evidence Singly phosphorylated
13 SER UP, PRIDE Combined yes
15 THR PRIDE yes
302 TYR PRIDE yes
348 SER PRIDE yes
409 TYR PRIDE yes
445 SER UP, PRIDE Combined yes

3D structure is not available

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Phosphorylated amino acids are colored red on the inner ring.

The first amino acid of the protein sequence is colored darker on each ring.

Phospho peptides

Showing 9 results

Sequence Modified position (Swiss-Prot) Peptide start Peptide end Modified position (Peptide) Number of projects
13 2 29 12 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD006482 1 Identification of Missing Proteins in the Phosphoproteome of Kidney Cancer Homo sapiens (Human) COMPLETE 2017-09-01 kidney
13 9 28 5 7
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD004252 1 Modulating the selectivity of affinity absorbents to multi-phosphopeptides by a novel competitive substitution strategy Homo sapiens (Human) PARTIAL 2016-08-03 cell culture -
PXD000612 63 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
PXD003531 6 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD001333 4 Anion-Exchange Chromatography of Tryptic and Phosphopeptides: WAX vs. SAX and AEX vs. ERLIC Homo sapiens (Human) PARTIAL 2015-04-23 HeLa cell -
PXD002286 65 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 - -
PXD004452 8 HeLa proteome of 12,250 protein-coding genes Homo sapiens (Human) PARTIAL 2017-06-12 liver,colon -
PXD000680 2 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell -
13 9 29 5 3
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 2 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture
PXD003531 7 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD006482 8 Identification of Missing Proteins in the Phosphoproteome of Kidney Cancer Homo sapiens (Human) COMPLETE 2017-09-01 kidney -
15 9 28 7 4
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD000612 34 Ultra-deep human phosphoproteome reveals different regulatory nature of Tyr and Ser/Thr-based signaling Homo sapiens (Human) PARTIAL 2014-08-06 cell culture -
PXD003531 2 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell -
PXD002286 14 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 - -
PXD000680 1 Stable isotope labeling of phosphoproteins for large-scale phosphorylation rate determination Homo sapiens (Human) COMPLETE 2014-04-15 HeLa cell,HEK-293 cell
15 9 29 7 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD001550 1 Human CRC cell line baseline phosphoproteomics Homo sapiens (Human) PARTIAL 2015-04-15 cell culture
302 294 307 9 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD003198 1 Characterisation of pancreatic ductal adenocarcinoma subtypes by global phosphotyrosine profiling Homo sapiens (Human) PARTIAL 2016-06-09 pancreatic cell line
348 343 352 6 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD002286 3 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 -
409 408 414 2 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD002286 1 Phospo-proteomic profiling of Castration Resistant Prostate Cancer Homo sapiens (Human) PARTIAL 2016-08-19 -
445 442 457 4 1
ProteomeXchange accession Peptide frequency Project Title Species Submission Type Publication Date Tissues USI 
PXD003531 8 Proteomics of Primary cells derived from Ovarian Cancer Homo sapiens (Human) PARTIAL 2017-04-03 primary cell

Structures

Showing 38 results

PDB id Chain Method Resolution Stoichiometry Interfacing Molecule/Chain Complex Formation Significance Score (CSS) P-sites View Structure
5OMP A X-ray 1.8799999952316284 2 [SO4]A:501 0.24457437 13, 15, 302, 348, 409
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
13 13 SER C 0.56 122.25840759277344 0.0
15 15 THR H 0.7 44.815555572509766 0.0
17 17 THR H 0.76 60.78689193725586 0.0
302 302 TYR C 0.93 195.9215850830078 0.0
348 348 SER C 0.82 91.47441864013672 0.0
409 409 TYR H 1.0 137.55560302734375 0.0
5NJX A X-ray 2.490000009536743 2 [SO4]A:501 0.2875889 13, 15, 302, 348, 409
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
13 13 SER C 0.56 127.00288391113281 0.0
15 15 THR H 0.7 41.68309020996094 0.0
17 17 THR H 0.76 65.09746551513672 0.0
302 302 TYR C 0.93 195.67092895507812 0.0
348 348 SER C 0.82 86.18470764160156 0.0
409 409 TYR H 1.0 160.1627197265625 0.0
1KT0 A X-ray 2.700000047683716 2 [SO4]A:603 0.26160535 302, 348, 409
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
302 302 TYR C 0.93 192.1239013671875 0.0
348 348 SER C 0.82 80.56890869140625 0.0
409 409 TYR H 1.0 184.46728515625 0.0
3O5E A X-ray 1.600000023841858 Monomer A 0.0 13, 15
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
13 13 SER C 0.56 117.54299926757812 0.0
15 15 THR C 0.7 59.24758529663086 0.0
17 17 THR H 0.76 47.118228912353516 0.0
4DRH A X-ray 2.299999952316284 8 [SO4]A:207 0.16380475 13, 15
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
13 13 SER C 0.56 52.47169494628906 0.0
15 15 THR H 0.7 20.478952407836914 0.0
17 17 THR H 0.76 22.614830017089844 0.0
3O5D A X-ray 4.0 Monomer A 0.0 13, 15
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
13 13 SER C 0.56 113.16857147216797 0.0
15 15 THR C 0.7 53.42337417602539 0.0
17 17 THR H 0.76 58.05550765991211 0.0
3O5F A X-ray 1.649999976158142 Monomer [CO3]A:141 0.1 15
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
15 15 THR C 0.7 63.2384147644043 0.0
17 17 THR H 0.76 95.02118682861328 0.0
3O5Q A X-ray 0.9599999785423279 Monomer A 0.0
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 66.50438690185547 33.66063690185547
3O5P A X-ray 1.0 Monomer A 0.0
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 66.7478256225586 34.07725143432617
5OBK A X-ray 1.0 Monomer [9QN]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 65.60914611816406 0.0
4DRQ A X-ray 1.0 Monomer [0OS]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 66.33644104003906 0.0
4JFM A X-ray 1.0199999809265137 Monomer [1KZ]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 64.86183166503906 0.0
4TX0 A X-ray 1.0299999713897705 Monomer [384]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 65.35700225830078 0.0
4JFI A X-ray 1.0499999523162842 Monomer [1KT]A:201 0.06609747
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 65.40614318847656 0.0
4DRN A X-ray 1.0700000524520874 Monomer [0MC]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 46.90470886230469 0.0
4JFJ A X-ray 1.0800000429153442 Monomer [1KU]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 66.82779693603516 0.0
4W9Q A X-ray 1.0800000429153442 Monomer [3JP]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 65.04550170898438 0.0
3O5R A X-ray 1.100000023841858 Monomer [FK5]A:1001 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 66.82716369628906 0.0
4DRO A X-ray 1.100000023841858 Monomer [0MD]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 64.6495590209961 0.0
4JFK A X-ray 1.149999976158142 Monomer [JFK]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 66.57408905029297 0.0
3O5O A X-ray 1.149999976158142 Monomer [SCN]A:1 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 56.15098571777344 0.0
4JFL A X-ray 1.2000000476837158 Monomer [1KY]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 65.9853515625 0.0
5BXJ A X-ray 1.2400000095367432 Monomer A 0.0
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 66.26551818847656 0.0
4TW7 A X-ray 1.25 Monomer [37K]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 55.19404983520508 0.0
4W9O A X-ray 1.2699999809265137 2 [3JQ]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR C 0.76 76.8974838256836 0.0
5DIU A X-ray 1.2999999523162842 Monomer [5BG]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 44.45072555541992 0.0
3O5L A X-ray 1.2999999523162842 Monomer [1PE]A:1 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 49.24845886230469 0.0
4TW6 A X-ray 1.399999976158142 Monomer [37L]A:201 0.056201827
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 42.19270706176758 0.0
4DRM A X-ray 1.4800000190734863 Monomer [0MC]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 65.52095794677734 0.0
4DRK A X-ray 1.5 Monomer [I63]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 50.22698211669922 0.0
3O5M A X-ray 1.600000023841858 Monomer B 0.0
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 51.651607513427734 0.0
5DIV A X-ray 1.649999976158142 Monomer [5BH]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 44.08363342285156 0.0
3O5J A X-ray 1.7000000476837158 Monomer A 0.0
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 71.2960433959961 0.0
3O5I A X-ray 1.7999999523162842 Monomer [ACT]B:141 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 48.39919662475586 0.0
4DRP A X-ray 1.7999999523162842 Monomer [0MD]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 42.77890396118164 0.0
3O5G A X-ray 2.0 Monomer A 0.0
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 47.34074401855469 16.351987838745117
5DIT A X-ray 2.25 Monomer [5B8]A:201 0.1
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 40.17765808105469 0.0
3O5K A X-ray 2.700000047683716 Monomer A 0.0
Swiss-Prot position PDB position Residue Secondary Structure Conserved Scale Accessible surface area Buried surface area
17 17 THR H 0.76 46.553958892822266 0.0

Mutations

Showing 0 results

Swiss-Prot Position Amino acid (Wild type) Amino acid (Variant) Variant Type Disease